Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX479562: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-322669' containing sample 'TKK_03_0040'
2 ILLUMINA (Illumina HiSeq 2000) runs: 2.7M spots, 543.6M bases, 245.2Mb downloads

UUID: 6875f969-f01e-4a5e-8172-469b9cae2538

Design: Illumina sequencing of Mycobacterium tuberculosis TKK_03_0040 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - KRITH 2

PRJNA235406 • SRP039130 • All experiments • All runs

Sample:

SAMN02585896 • SRS564952 • All experiments • All runs

Organism: Mycobacterium tuberculosis TKK_03_0040

Library:

Name: Pond-322669

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 12 attributes...) (hide...)

analysis_type: AssemblyWithReference

gssr_id: 481160.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5EVEX

material_type: DNA:DNA Somatic

product_order: PDO-2814

product_part_number: P-MCV-0004

project: G58040

research_project: RP-114

root_sample_id: SM-4P5AO

sample_id: SM-5EVEX

work_request: 39951

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-26 09:39:52.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 2.7M spots, 543.6M bases, 245.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR1180257	1,338,326	270.3M	122.9Mb	2014-03-01
SRR1183048	1,352,560	273.2M	122.3Mb	2014-03-05

ID:: 668996

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